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Bika Open Source LIMS in the Philipines
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Bika Open Source LIMS Slack team
Bika Open Source LIMS Issue Types
Types Issues in Bika Tracker cropped
Canadian Bika Open Source LIMS Service providers
GSoC 2018 Bika LIMS Ideas
Tracker History
User Manual
Table of Contents
Recent Updates
Disclaimer
1 Introduction
1.1.1 User preferences and passwords
1.1.2 LIMS page lay-out
1.1.3 Bika Browser convention
1.1.4 Folder structure
1.1.5 Workflow in four steps
1.1.6 Dashboard
1.2.1 Display preferences
1.2.2 Tables
1.2.3 Icons
1.2.4 Search
1.2.5 Bika Barcode use
1.3 Language Preference
1.4 Brand your LIMS
1.5 Export Objects and lists as CSV
1.6 Technical. Hardware. Server stack
1.6.1 LIMS Version
1.6.2 ERD
1.6.3 Undoing transactions
1.7 Lab Content and Document management
1.6.4 Upgrading Add-on Products
2 Users and Groups
2.1 Lab user groups and their roles
2.2 Authorisation matrix
2.3 Creating Users
2.4 Lab users in the UI
3 Clients
3.1 Client Organisations and their Contacts
3.2 Managing Clients
3.3 Client Contacts and User privileges
3.4 Removing Clients
4 Configuration
4.1 Configuration Convention
4.2 Order of Configuration
4.3 Global settings
4.4 ID server
4.5 Samples and Sampling
4.5.1 Sample Point Locations
4.6 Analytical Methods
4.8 Import Bika Setup data
4.9 Setup migration
5 Instruments
5.1 Instrument Configuration
5.2 Instrument Maintenance
5.3 Instrument QC
5.4 Corrective Action
5.5 How To bring an instrument back on line after failing QC
6 Analysis Services
6.1 Description, Analysis
6.2 Measure of Uncertainty
6.3 Results Options
6.4 AS Methods
6.5 Sample attributes
6.6 Advanced
6.7 Results Interpretation Templates
7 Calculations
7 Calculations
7.1 Capturing Calculated results
8 Analysis Templates
Sample Registration Templates
9 Product Specifications
10 QC
10.1 Reference Definitions
10.2 Creating Reference Samples
10.3 Capturing QC results
10.4 QC Failure Workflow
10.5 Control Charts
10.7 Audit trails
10.6 Reference Sample Expiry
11 Workflow
11.1 Sample Registration
11.2 Sampling. Preservation
11.3 Receiving and Labeling Samples
11.3.1 Sample Rejection
11.3.2 Sample Preparation
11.4 Results Capture
11.5 Verifying results
11.6 Results publication. COA
11.7 Invalidating erroneously published Results
11.8 Secondary Testing of Samples
11.9 Sample Prioritisation
11.10 Workflow States summary
Sampling Rounds and Surveys
11.3 Recebimento e Rotulagem de Amostras
11.4 Results Capture
12 Batching
12.1 Creating a Sample Batch
12.2 Batch Sample Import
12.2.1 Preparing the CSV
12. 2 Importação de Amostra em Lote
12.2.1 Preparando o CSV
13 Worksheets
13.1 Creating Worksheets
13.2 Add QC Controls
13.3 Results Capture
13.4 Results Verification. Retesting
13.5 Creating Worksheet Templates
13.5 Worksheets from Templates
13.7 Export Worksheets to Instruments
13.8 Instrument Results Import
13.9 Results Spreadsheet Imports
13.1.1 Creating Worksheets from Sample Lists
13.5 Planilhas de Modelos
14 Management Reports
15 Aliquots. Sample Partitioning
16 Storage
15.1 Storage Facilities
15.2 Storing Samples
15.3 Retrieving Samples
17 Billing
Cobrança. Faturas em Lote
Prepaid testing. Invoicing Use Case
Invoice Content
18 Background processing
17. 3 Configuring Queue management
17.4 Using Asynchronous Processing
Technical
Senaite 1 to 2 Configuration Migration as upgrade
Seeding Bika Senaite IDs
Images - Translations
42 Error Messages and Alerts
Instrument messages
Specifications changed
Videos
Bika Senaite LIMS Video. Batch Sample Registration
Bika Senaite LIMS Video. Receiving and Labelling Samples
Bika Senaite LIMS Video. Worksheets
Bika Senaite LIMS Video. Verification and Publication
Bika Instrument Interfacing
Creating and Using Calculations
Creating and using Worksheet Templates
Bulk Sample Import
Bika QC. Reference Definitions and Samples
Spacers. Templates
Recent Bika Senaite Manual updates
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Plone as lab information repository
Issue Tracking
Sign up to the Bika Open Source LIMS Tracker
Log an issue
Use Cases
Use Case. Bulk over-the-counter Samples
Use Case. Wet Samples
Configuring Bika for Fire Assays
Images - Fire Assay use case
18. Billing
Images - Batch Invoices
Bika Cannabis
Senaite Health
Senaite Health Configuration
Doctors. Care givers
Create, View and Edit Patients
Creating a Clinical Case
Anonymous Patients. Quicker Case and AR creation
Creating Analysis Requests for Anonymous Patients
Sensitivity and Susceptibility Testing
Life Threat Alerts. Panic levels
Regulatory Inspector role
Images ASs
Bacterial Identification
Translate the manual
Images - ERD
Bika Senaite Open Source LIMS ERD - QC
Bika Senaite Open Source LIMS ERD - Setup
Bika Senaite Open Source LIMS ERD - Clients
Bika Senaite Open Source LIMS ERD - Template configuration
Bika Open Source LIMS ERD - Samples Analyses Worksheets
Images - Translating the Manual
Install Google Translate
Pin Google Translate
Translate the LIMS manual
Bika Open Source LIMS page translated
Demos
Bika LIMS 3
Bika Health 3
Bika Interlab 2
Video
Contribute. Cattle or Code
About Bika
FAQ
Is Bika LIMS really free?
About Support Buckets
Which hardware?
Get going quickly. Save
Like all LIMS, the Bika UIX sucks
How does Senaite LIMS relate to Bika?
Contract us
Blogs and Rants
Cannot afford LIMS? Join forces
Any commendable lab blogs?
Kaapse Fisant, Cape Spurfowl née Francolin Pternistis Capensis
Libre Liberia
Open Source wheelchair and robohand
1st OpenLabConnect release. Open Source Instrument middle ware
Free LIMS – An Oxymoron? Really
Open Source expectation and misconception observations. Advice
Occupy Wall Street!
Someone told me nothing happened today
What's in a name?
May day. Not Mayday. All well
The Year that was
The End for Open Source evangelism
Bika Lab Systems has a website again
At long last, training videos
The Elusive 3 month LIMS Implementation Project
Images
icons
Microscope icon 64
drop and graph icon 64
Setup icon 32
Checkboxes icon 64
Book icon 64
Worksheet template icon 64
Magnifying glass icon 64
Chain link icon 64
Blank icon 64
Control icon 64
Duplicate icon
Clipboard and Chain icon 128
Green and Brown men icon 64
Green man icon 64
Yellow man icon 64
Blue man icon 64
Red man icon 64
Stethoscope icon 64
Book icon 32
Drop icon 64 green
Lab icon blue green 64
Storage Cupboard icon 32
Storage Room Door Icon 32
Freezer icon 32
Shipment Crate icon 32
Calendar Year icon 32
Container Types icon 32
Calculator icon 32
Ruler icon 32
Drops Icon 32
Reference Sample Drop icon 32
Foir drops icon 32
Folder structure icon 32
Email Icon 64
Folder icon 64
Clipboard icon 64
Preadsheet on ring binder icon 64
Paper Clip icon 64
Globe icon 64
Dropper icon 32
Lab flasks products icon 32
Molecule icon 32
Test tube blue icon 32
Erlenmeyer flasks icon 32
Allergen microbio icon 32
Disease microbio icon 32
Dropper only icon
email icon 64
drop blue icon
Lab blogs
Footnote icon
Green square
Red Square
Grey Square
Yellow Square
Black Square
Announcement emoji
Check mark single icon
Bika Open Source LIMS example classic icon set
Bulk Sample Import
Logos
LIMS logo 130 x 39
Health logo 143 x 39
Interlab logo 144 x 39
Bika Lab Systems logo - Tell it as it is
Naralabs logo
Bika Health Foundation logo
BBK logo
Quantum
Benchmark
City of uMhlathuze
CARPHA
Purity Bika Health 3 Open Source LIMS sponsors. CLIA
SAWLA
LIMS Circus
Bika Lab Systems 200x
Github logo
BlackDuck Open HUB
Transifex logo
Github logo - Social coding
Paypal and Credit card donation button
UW DOHS Soul catcher logo
CAF SUN logo
SANBI logo
Open Source LIMS Collective. Bikalabs.org strip
Plone logo 192
Bika Health 375x or so
Google Summer of Code 2015 Banner
Google Summer of Code 2015 Logo
LIMS Circus logo
Free Software Fondation member # 11111
Bika Open Source LIMS at the Plone Conference 2015
Georgian coat of arms
CDC logo
Georgia MoH
LimeLyte
Incyte Systems
Bika OpenSource LIMS Training
B3Africa - Bridging Biobanking and Biomedical Research across Europe and Africa
Riding Bytes logo
Bika Open Source LIMS at Pycon 2016
De Bortoli Wines. Bika Open Source LIMS users
University of Washington. Bika Open Source LIMS sponsor
Equigerminal. Bika Health Open Source LIMS for veterinary lab sponsors
Lab San Martin, Costa Rica. Bika Open Source LIMS Sponsor
South African Department of Trade and Industry supports Bika Health, Open Source LIMS for health care laboratories
Zimbabwe Ministry of Health supports Bika Health, Open Source LIMS for public health care laboratories
RTI International supports Bika Health, Open Source LIMS for public health care laboratories
City of uMlatuze supports Bika Open Source LIMS for water quality management
Bika Open Source Biobank
Stellenbosh University Medical Faculty uses Bika Biobank
South African National Health Laboratory Service (NHLS) use Bika Open Source LIS, Bika Health
Open Source Plone Conference 2016
Al Open Source LIMS by Bika Logos
Plone org x48
Plone com x48
Plone conf 2016. Open Source CMS and LIMS platform
Bika Biobank proto-type Frisky Francoline logo
Bika Open Source Biobank 0.9 Frisky Francolin
Bika Open Source Biobank 0.9 Frisky Francolin
B3Africa Bika Open Source Biobank 0.9 Frisky Francolin
B3Africa Bika Open Source Biobank 0.9 Frisky Francolin 500x
Bika Open Source Biobank 0.9 Frisky Francolin 450x
IAEA logo landscape
IAEA logo landscape 200
Accel logo 200
Ubuntu Open Source logo adaption
Coat of Arms Liberia 591 x
Liberia Coat of Arms 400 x
PayPal Open Source LIMS donations
PayPal Open Source LIMS donations
Credit card Open Source LIMS donations
Bika Cannabis Open Source LIMS
University of Massachusettes supports Bika Open Source LIMS
Bika Open Source LIMS Branch and logos 2017
Plone Conference 2017 logo
Creative Commons logo
Dr. Akbar Niazi Teaching Hospital uses Bika Open Source LIS
Bika Health Open Source LIMS Foundation
Bika Health Open Source LIMS Foundation
Bika Health Open Source LIMS Foundation
Bika LIMS uses Slack
Bika Open Source LIMS in GSoC 2018
Webtide South African Bika Open Source LIMS developers
Bika Lab Systems Tell it as it is
Webtide South African Bika Open Source LIMS developers
Bika Lab Systems Creative Commons BY SA
Bika Open Source LIMS Creative Commons BYSA
Bika Senaite Demo ISO 17025 accreditation seal
Bika Biobank Open Source BIMS frisky francolin
Bika Health Senaite banner x 60
Bika Health Senaite x 60
2017 Bika Open Source LIMS for Chemistry amd Microbiology
Bika Senaite uses Transifex 200x
Plone logo blue
IRRI Rice knowledge bank logo
Froid logo
ALS Global Naledi uses Bika Open Source LIMS
Froid OpenHIM logo combo
Dummy ISO 17025 Schedule of Accreditation logo 220 x
Logo Bika Open Source LIMS Collective
Bika Open Source LIMS Sponsors
The Bika Corral - For Open Source LIMS Bikaneros. Ranching cattle and code, shooting straight
The Bika Corral - For Open Source LIMS Bikaneros. Ranching cattle and code, shooting straight
The Bika Corral - For Open Source LIMS Bikaneros. Ranching cattle and code, shooting straight
The Bika Corral - For Open Source LIMS Bikaneros. Ranching cattle and code, shooting straight
Bika LIMS for Covid screening
Bika Open Source LIMS for Covid screening
Bika Open Source LIMS for Covid screening
Bika Open Source LIMS for Covid screening
Atlassian bundle 305 x 80
Black Lives Matter
These global organisations use open source software
Bika Open Sourcer Covid LIMS logo
dtic logo
Test It lab uses Bika Open Source LIMS
Hydrochem uses Bika Open Source LIMS
Quantilab uses Bika Open Source LIMS
Geoangol uses Bika Open Source LIMS
Qure Cannabis lab uses Bika Open Source LIMS
Zimlabs uses Bika Open Source LIMS
Greenhill labs uses Bika Open Source LIMS
Bika Fire Assay logo - Open Source LIMS for mining and exploration
Hydrochem logo
Westago uses Bika Open Source LIMS
Jira logo new x50
Atlassian logo new x 40
Imexlogic uses Bika Open Source LIMS
Test It uses Bika Open Source LIMS
SADCAS accredited labs use Bika Open Sopurce LIMS
Test It SANAS ISO 17025 accredited lab uses Bika Open Source LIMS
Branches 2017
Bika Health Open Source LIS logo 2017
Bika Open Source Biobank logo 2017
Bika Health Open Source LIMS logo 2017
Bika Open Source Cannabis LIMS logo 2017
Bika Open Source LIMS logo 2017
Bika Interlab Open Source LIMS for Proficiency Testing logo 2017
Bika Water - Open Source LIMS for water quality management LIMS logo 2017
Bika Health Open Source LIS logo 2017
Bika Health Senaite logo 2017 300x
Bika Cannabis Open Source sans LIMS logo 300x
Bika Open Source Covid LIMS logo
Bika Tribos Open Source LIMS for Tribology
Thumbnails and Buttons
Open Source LIMS Brochure p1 Thumbnail 100x
Health Open Source LIMS Brochure p1 Thumbnail 100x
Health Open Source LIMS Brochure p2 Thumbnail 100x
Open Source LIMS Brochure p2 Thumbnail 100x
Bika Interlab Open Source LIMS for Proficiency Testing Brochure Thumbnail
SF Donate to this Open Source project Button
Bitcoin Donate to this Open Source project Button
Tweet #BikaLIMS @BikaLIMS
Emoji Hearts
Bika Lab Systems project management. Pick any two of Good, Fast, Cheap
Bika Senaite Dashboard thumbnail 210 x
Donate 10 USD to Bika Open Source LIMS
Donate 50 USD to Bika Open Source LIMS
Donate 100 USD to Bika Open Source LIMS
Donate 25 USD to Bika Open Source LIMS
Creditcards for Bika Open Source LIMS donations
In the lab
Old chemistry 1
Old chemistry 2
Scientists staring at Chicken and eggs
Hydrochem front page image
Bika Fire Assay Open Source LIMS for Geochemistry
Zimlabs Fire assay
Zimlabs AA
Sampling for Bika Open Source LIMS
Wastewater for analysis in Bika Open Source LIMS
Water Sample bottles
Diagrams
2018 Bika Open Source LIMS web based flow diagram full screen
Levey-Jennings chart
Bika LIMS QC Control Levels Graph
Bika Senaite Open Source LIMS workflow diagram 201712
Bika Senaite Health LIS Flow Diagram
Bika Lab Systems project management canvass. Pick any two of Good, Fast, Cheap
ALS reduced Bika web based workflow
Bika Senaite Analysis Request Workflow step
Bika Senaite Receive workflow
Bika Senaite Results Capture QC Verify
Bika Senaite LIMS Workflow 4 Publication
Bika Open Source LIMS project managemnt triangle
Bika Health Workflow Diagram 1000 x
Bika Health Workflow Diagram 800 x 750
Bika Open Source LIMS issue resolution 2018 Q2
Instrument QC Control chart in Bika | Senaite Open Source LIMS
Baobab LIMS workflow diagram. Open Source Bika Biobank fork
Bika Water Open Source LIMS
Bika Cannabis flow diagram. Open Source LIMS for regulated Industries
Bika Lab Systems contributions to Bika Open Source LIMS
Bika Lab Systems project management. Pick any two of Good, Fast, Cheap
The Lights changed - PM triangle 2017 - 2019
Bika Open Source LIMS Task tracker 2017 - 2019
LIMS Flow. Batches, Analysis Requests, Analyses, Worksheets, QC
Marketing
Brochure 23 slides
Word cloud of Open Source LIMS in slowdown doing well
The benefits of Professional Open Source LIMS
ISO 17025 Ready LIMS
Flexible LIMS workflow
TCO for Open Source LIMS
LIMS challenges for Laboratories
Open Source LIMS Support
Bika Open Source LIMS References
Bika Lab Systems website images
1 Professional Open Source advantages
2 Open Source LIMS is robust and secure
3 Open Source LIMS can be customised to perfect fit
4 Bika Branches for different lab disciplines
5 Bika Open Source LIMS Collective
Bika Lab Systems professional services catalogue
About Bika Lab Systems the primary sponsor of Bika Open Source LIMS
Bika Lab Systems is supported by the Bika Open Source LIMS community
The Benefits of Bika Open Source LIMS
Bika Open Source LIMS Features
Frequently asked Questions about Bika Open Source LIMS
Bika Open Source web based LIMS flow diagram
Bika Health Open Source web based LIMS flow diagram
Khoi San rock painting, re Gaob
Lines of Bika LIMS code
Bika LIMS monthly commits
Bika Open Source coding languages
Bika Open Source LIMS Top level ERD
Code Additions and Deletions
Bika Donation Bitcoin QR code
Bika 3 code analysis only - lines of code
Bika 3 code analysis only - number of commits
LIMS Circus Banner
Georgia CDC workshop LIMS presenters
Big BIMS
Small BIMS
Open Source Biobank workflows being added to Bika Healt, LIMS/LIS for health care laboratories
Integrated Open Source Biobank Management System. BIMS
Open Source Biobank workflows being added to Bika Healt, LIMS/LIS for health care laboratories
Open Source Biobank workflows being added to Bika Healt, LIMS/LIS for health care laboratories
Bika Open Source Integrated Biobank
Bika Open Source Biobank Phase I
Pycon Namibia 2016 Blitz talk queue
Django Girl
The Safariseat
Open Source prostheses
Meme Smoke and Mirrors everywhere
Commitstrip.com on Open Source Projects
Bika LIMS 3.2 Open Source LIMS
Cannoical's Mark Shuttleworth is an Open Source hero
Bika Health Open Source LIMS Foundation
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Mosso Balance
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Ngunis
Nguni herd coming home
Bika Open Source LIMS Screenshot
Bika Open Source LIMS Screenshot COA
Bika Open Source LIMS Screenshot COA
Bika Cannabis Open Source LIMS screenshot Samples 15
The FBI uses Plone
Create new issue in the Bika Open Source LIMS tracker
Bika Open Source LIMS new tracker issue
Rice paddy and worker
Consumable Inventory in Bika Open Source LIMS
COA images
Bika LIMS COA header
Bika LIMS COA Sample Summary
Bika Open Source LIMS COA results table 1
BikaOpen Source LIMS COA results out of range
Bika Open Source LIMS COA Results interpretation
Bika Open Source LIMS COA Signatories
Bika Open Source LIMS COA Footer
Bika Open Source LIMS single sample COA page 1
Bika Open Source LIMS single sample COA page 2
Bika Open Source LIMS single sample COA page 3
Bika Open Source LIMS multi sample COA sample attributes
Bika Open Source LIMS multi sample COA results interpretation
Bika Open Source LIMS multi sample COA results tables
Bika Open Source LIMS multi sample COA p1
Bika Open Source LIMS multi sample COA p2
Bika Open Source LIMS multi sample COA p3
Bika Open Source LIMS multi sample COA p4
Off white navigation bar in Bika Open Source LIMS
Bika Open Source LIMS Team
中国人
特点和优势
Images Chinese
Bika 开源 LIMS 中文流程图
Bika 开源 LIMS 手册第 1 页
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